| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Australian | Zoogeographic realm | native | 5259 |
| Bensbach River | River (basin) | native | 50786 |
| Ethiopian | Zoogeographic realm | native | 13333 |
| Lake Mainit | Lake | native | 280 |
| Mekong | River (basin) | native | 12693 |
| Naujan Lake | Lake | native | 280 |
| Oriental | Zoogeographic realm | native | 12693 |
| Pacific Ocean | Sea/Bay/Gulf | native | 125536 |
| Pagbilao Bay | Sea/Bay/Gulf | native | 11338 |
| Palearctic | Zoogeographic realm | native | 559 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 125536 |
| Taal Lake | Lake | native | 12165 |