| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Arnhem Coast to Gulf of Carpenteria | Sea/Bay/Gulf | native | 75154 |
| Bonaparte Coast | Sea/Bay/Gulf | native | 75154 |
| Calamianes Islands | Sea/Bay/Gulf | native | 48613 |
| Exmouth to Broome | Sea/Bay/Gulf | native | 75154 |
| Indian Ocean | Sea/Bay/Gulf | native | 5296 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5296 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 5296 |
| Pacific Ocean | Sea/Bay/Gulf | native | 5296 |
| South China Sea | Sea/Bay/Gulf | native | 5296 |
| Verde Island Passage | Sea/Bay/Gulf | native | 37603 |
| West Philippine Sea | Sea/Bay/Gulf | native | 48613 |